STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN27536.1DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (395 aa)    
Predicted Functional Partners:
AHN29504.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.838
AHN27533.1
Alpha/beta hydrolase fold.
 
     0.801
AHN27534.1
Hypothetical protein.
  
  
 0.736
AHN27535.1
Hypothetical protein.
  
  
 0.736
AHN27532.1
2-hydroxy-3-keto-5-methylthiopentenyl-1- phosphate phosphatase related protein.
 
     0.707
AHN27538.1
Hypothetical protein.
 
     0.699
AHN27537.1
Hypothetical protein.
  
     0.678
AHN27616.1
Glucose-1-phosphate thymidylyltransferase.
  
  
 0.670
AHN29626.1
Undecaprenyl-phosphate galactosephosphotransferase.
  
  
 0.612
AHN27539.1
Aminotransferase, class III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
     0.602
Your Current Organism:
Snodgrassella alvi wkB2
NCBI taxonomy Id: 1196094
Other names: Candidatus Snodgrassella alvi wkB2, S. alvi wkB2
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