STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN27574.1Hypothetical protein. (256 aa)    
Predicted Functional Partners:
AHN27573.1
Hemin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.999
AHN27572.1
Periplasmic hemin-binding protein.
 
 
 0.960
AHN27571.1
Hemin transport protein HmuS.
   
 0.840
AHN29400.1
Putative acinetobactin biosynthesis protein.
  
  
 0.788
AHN27996.1
Molybdenum transport system permease protein ModB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  
 0.769
AHN27922.1
YbbL ABC transporter ATP-binding protein.
  
     0.737
AHN27570.1
TonB-dependent hemin, ferrichrome receptor.
  
  
 0.557
lolD
Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
  
  
0.534
AHN28933.1
Ferric anguibactin transport system permease protein fatD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.520
AHN29416.1
Ferrous iron transport permease EfeU.
   
    0.467
Your Current Organism:
Snodgrassella alvi wkB2
NCBI taxonomy Id: 1196094
Other names: Candidatus Snodgrassella alvi wkB2, S. alvi wkB2
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