STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN27889.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
AHN27888.1
Phage tail tape measure protein lambda family.
       0.773
AHN27887.1
Hypothetical protein.
       0.714
AHN27885.1
Hypothetical protein.
       0.709
AHN27886.1
Hypothetical protein.
       0.709
AHN27890.1
Hypothetical protein.
       0.610
AHN27884.1
Phage protein.
       0.531
AHN27880.1
Hypothetical protein.
       0.527
AHN27881.1
Hypothetical protein.
       0.527
AHN27882.1
Hypothetical protein.
       0.527
AHN27883.1
Hypothetical protein.
       0.527
Your Current Organism:
Snodgrassella alvi wkB2
NCBI taxonomy Id: 1196094
Other names: Candidatus Snodgrassella alvi wkB2, S. alvi wkB2
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.