STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN28334.1Hypothetical protein. (73 aa)    
Predicted Functional Partners:
AHN28333.1
Hypothetical protein.
  
 
 0.979
AHN28338.1
Phage baseplate.
  
 
 0.960
AHN28339.1
Hypothetical protein.
  
 
 0.957
AHN28337.1
Hypothetical protein.
  
   0.954
AHN28336.1
Phage lower baseplate protein.
  
  
 0.951
AHN28335.1
Gene D protein.
  
  
 0.950
AHN28329.1
Phage tail sheath monomer.
  
   0.930
AHN28330.1
Hypothetical protein.
  
   0.928
AHN28332.1
Putative phage-related tail transmembrane protein.
       0.789
AHN27894.1
Phage protein.
  
  
 0.685
Your Current Organism:
Snodgrassella alvi wkB2
NCBI taxonomy Id: 1196094
Other names: Candidatus Snodgrassella alvi wkB2, S. alvi wkB2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.