STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN28705.1Putative periplasmic protein. (387 aa)    
Predicted Functional Partners:
AHN28703.1
Putative poly(beta-D-mannuronate) O-acetylase; Belongs to the membrane-bound acyltransferase family.
    0.953
AHN28704.1
Putative periplasmic protein.
 
     0.935
AHN28860.1
Hypothetical protein.
  
 
 0.587
AHN28347.1
Hypothetical protein.
   
   0.572
AHN29412.1
YadA-like protein.
   
 
 0.485
cysG
Uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.
     
 0.466
AHN29301.1
Hemagglutinin/hemolysin-related protein.
   
 
 0.462
AHN29304.1
Hypothetical protein.
   
 
 0.462
AHN29308.1
Hemagglutinin/hemolysin-related protein.
   
 
 0.462
AHN29314.1
Hypothetical protein.
   
 
 0.462
Your Current Organism:
Snodgrassella alvi wkB2
NCBI taxonomy Id: 1196094
Other names: Candidatus Snodgrassella alvi wkB2, S. alvi wkB2
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