STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN28726.12-nitropropane dioxygenase. (389 aa)    
Predicted Functional Partners:
AHN28280.1
Nitrate/nitrite transporter.
  
 
  0.904
AHN28281.1
Nitrate/nitrite transporter.
  
 
  0.904
AHN28282.1
Respiratory nitrate reductase alpha chain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
  0.900
AHN28283.1
Respiratory nitrate reductase beta chain.
     
  0.900
AHN28285.1
Respiratory nitrate reductase gamma chain.
    
  0.900
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.617
AHN27823.1
3-oxoacyl-[ACP] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 0.533
AHN29221.1
3-oxoacyl-[acyl-carrier-protein] synthase, KASII; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
  
 0.529
AHN29162.1
Malonyl CoA-acyl carrier protein transacylase.
  
  
 0.526
AHN27820.1
3-oxoacyl-[ACP] synthase FabV like; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 0.513
Your Current Organism:
Snodgrassella alvi wkB2
NCBI taxonomy Id: 1196094
Other names: Candidatus Snodgrassella alvi wkB2, S. alvi wkB2
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