STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN29320.1Hypothetical protein. (100 aa)    
Predicted Functional Partners:
AHN29321.1
Branched-chain amino acid transport protein azlC.
 
   
 0.953
AHN28860.1
Hypothetical protein.
  
     0.493
AHN28887.1
Hypothetical protein.
  
     0.460
AHN28330.1
Hypothetical protein.
  
     0.445
AHN28329.1
Phage tail sheath monomer.
  
     0.402
AHN29226.1
Hypothetical protein.
  
     0.402
Your Current Organism:
Snodgrassella alvi wkB2
NCBI taxonomy Id: 1196094
Other names: Candidatus Snodgrassella alvi wkB2, S. alvi wkB2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.