STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN29392.1Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (313 aa)    
Predicted Functional Partners:
AHN29394.1
Ferric siderophore ABC transporter, ATP-binding protein.
 
  
 0.973
AHN29395.1
Ferric siderophore ABC transporter, periplasmic siderophore-binding protein.
 
  
 0.971
AHN29393.1
Iron compound ABC uptake transporter permease protein PiuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
0.940
AHN28934.1
ABC-type enterochelin transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 0.924
AHN28935.1
Iron(III) dicitrate transport ATP-binding protein FecE; TC 3.A.1.14.1.
 
  
 0.888
AHN28932.1
Periplasmic binding protein.
 
  
 0.879
AHN28991.1
Hypothetical protein.
 
  
 0.878
AHN29391.1
Hypothetical protein.
       0.773
AHN29396.1
Ferrichrome-iron receptor.
 
     0.585
AHN27573.1
Hemin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
   
0.503
Your Current Organism:
Snodgrassella alvi wkB2
NCBI taxonomy Id: 1196094
Other names: Candidatus Snodgrassella alvi wkB2, S. alvi wkB2
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