STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN29405.12,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [enterobactin] siderophore. (255 aa)    
Predicted Functional Partners:
AHN29400.1
Putative acinetobactin biosynthesis protein.
 
 0.995
AHN29399.1
2,3-dihydroxybenzoate-AMP ligase.
 
 0.991
AHN29404.1
Isochorismate synthase of siderophore biosynthesis.
 
  
 0.942
AHN29403.1
Phosphopantetheinyl transferase component of siderophore synthetase; Belongs to the P-Pant transferase superfamily.
 
  
 0.731
AHN29389.1
Siderophore biosynthesis non-ribosomal peptide synthetase modules.
  
   0.651
AHN29398.1
Non-ribosomal peptide synthetase modules, siderophore biosynthesis.
 
   0.617
AHN29390.1
Non-ribosomal peptide synthetase.
  
   0.563
AHN29402.1
Putative ABC transporter.
 
 
  0.556
AHN27812.1
Conserved acyl-coenzyme A synthetase-related protein.
  
 
 0.555
AHN28930.1
Putative esterase.
  
    0.552
Your Current Organism:
Snodgrassella alvi wkB2
NCBI taxonomy Id: 1196094
Other names: Candidatus Snodgrassella alvi wkB2, S. alvi wkB2
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