STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN29570.1Hypothetical protein. (484 aa)    
Predicted Functional Partners:
AHN29569.1
Hypothetical protein.
  
    0.791
AHN29567.1
Hypothetical protein.
       0.732
AHN29568.1
Putative ATP/GTP-binding protein.
  
    0.731
AHN29566.1
Hypothetical protein.
       0.667
AHN28347.1
Hypothetical protein.
    
 
 0.615
AHN28755.1
Putative RNA polymerase; Belongs to the sigma-70 factor family. ECF subfamily.
    
   0.504
AHN28962.1
RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily.
    
   0.504
AHN29571.1
Membrane-bound lytic murein transglycosylase A precursor.
       0.485
Your Current Organism:
Snodgrassella alvi wkB2
NCBI taxonomy Id: 1196094
Other names: Candidatus Snodgrassella alvi wkB2, S. alvi wkB2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.