STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN29589.1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (297 aa)    
Predicted Functional Partners:
AHN27643.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.704
AHN27713.1
LysR family transcriptional regulator YnfL; Belongs to the LysR transcriptional regulatory family.
  
     0.658
AHN29588.1
Hypothetical protein.
       0.572
AHN29160.1
Cys regulon transcriptional activator CysB; Belongs to the LysR transcriptional regulatory family.
  
   
 0.561
AHN28957.1
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.540
AHN27794.1
Glutamate synthase [NADPH] large chain.
  
  
 0.491
AHN29586.1
Magnesium transporter; Acts as a magnesium transporter.
 
     0.441
Your Current Organism:
Snodgrassella alvi wkB2
NCBI taxonomy Id: 1196094
Other names: Candidatus Snodgrassella alvi wkB2, S. alvi wkB2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.