STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN24589.12-deoxy-D-gluconate 3-dehydrogenase. (266 aa)    
Predicted Functional Partners:
AHN24587.1
Putative 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase.
 
  
 0.833
AHN26175.1
Nonribosomal peptide synthetase.
  
 
 0.682
fabD
Malonyl CoA-acyl carrier protein transacylase.
 
 0.674
AHN25392.1
Alfa-L-rhamnosidase.
   
 
 0.639
AHN24588.1
Oligogalacturonate lyase.
  
  
 0.634
nifJ
Pyruvate-flavodoxin oxidoreductase.
   
 
 0.595
AHN24961.1
Alcohol dehydrogenase; Acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.559
AHN24590.1
Pectin degradation protein KdgF.
  
  
 0.542
lacZ
Beta-galactosidase.
  
  
 0.530
AHN27006.1
3-oxoacyl-[acyl-carrier-protein] synthase, KASII; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.527
Your Current Organism:
Gilliamella apicola
NCBI taxonomy Id: 1196095
Other names: ATCC BAA-2448, Candidatus Gilliamella apicola, G. apicola, Gilliamella apicola Kwong and Moran 2013, NCIMB 14804, strain wkB1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.