STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN24764.1Putative phosphatase YfbT. (218 aa)    
Predicted Functional Partners:
AHN25170.1
PTS system, mannitol-specific IIB component / PTS system, mannitol-specific IIC component.
  
 
  0.909
mtlD
Mannitol-1-phosphate 5-dehydrogenase.
    
 0.905
AHN24763.1
Tagatose 1,6-bisphosphate aldolase.
       0.781
AHN24762.1
Tagatose-6-phosphate kinase.
  
    0.768
treC
Trehalose-6-phosphate hydrolase.
  
 0.637
AHN25378.1
Xanthosine permease.
  
  
 0.530
AHN26452.1
Nucleoside permease NupG.
  
  
 0.530
AHN26304.1
PTS beta-glucoside transporter subunit EIIBCA; PTS system, beta-glucoside-specific IIB component / PTS system, beta-glucoside-specific IIC component / PTS system, beta-glucoside-specific IIA component.
  
  
 0.470
AHN26414.1
PTS beta-glucoside transporter subunit IIABC; PTS system, beta-glucoside-specific IIB component / PTS system, beta-glucoside-specific IIC component / PTS system, beta-glucoside-specific IIA component.
  
  
 0.470
AHN26751.1
PTS beta-glucoside transporter subunit EIIBCA; PTS system, beta-glucoside-specific IIB component / PTS system, beta-glucoside-specific IIC component / PTS system, beta-glucoside-specific IIA component.
  
  
 0.470
Your Current Organism:
Gilliamella apicola
NCBI taxonomy Id: 1196095
Other names: ATCC BAA-2448, Candidatus Gilliamella apicola, G. apicola, Gilliamella apicola Kwong and Moran 2013, NCIMB 14804, strain wkB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.