STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN24802.1Hypothetical protein. (512 aa)    
Predicted Functional Partners:
AHN24799.1
PpkA.
 
  
 0.944
AHN24801.1
ABC-type antimicrobial peptide transport system, permease component.
 
    0.941
AHN24800.1
ABC transporter, ATP-binding protein.
 
  
 0.924
AHN24803.1
Hypothetical protein.
      0.917
AHN24805.1
Hypothetical protein.
 
    0.889
AHN24795.1
Putative virulence factor.
 
    0.881
AHN24797.1
Putative virulence factor.
 
     0.877
AHN24796.1
SrfB.
 
     0.876
AHN24804.1
Hypothetical protein.
       0.800
AHN25392.1
Alfa-L-rhamnosidase.
  
   0.728
Your Current Organism:
Gilliamella apicola
NCBI taxonomy Id: 1196095
Other names: ATCC BAA-2448, Candidatus Gilliamella apicola, G. apicola, Gilliamella apicola Kwong and Moran 2013, NCIMB 14804, strain wkB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.