STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN24880.1Putative transcriptional regulator of sorbose uptake and utilization genes. (323 aa)    
Predicted Functional Partners:
AHN24958.1
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase, dihydroxyacetone binding subunit DhaK.
     0.915
AHN26119.1
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase, dihydroxyacetone binding subunit DhaK.
      0.889
AHN24881.1
L-sorbose 1-phosphate reductase.
 
   
 0.600
AHN24879.1
Polygalacturonase; Belongs to the glycosyl hydrolase 28 family.
       0.460
AHN26242.1
Sorbitol-6-phosphate 2-dehydrogenase.
 
     0.412
AHN26240.1
PTS system, glucitol/sorbitol-specific IIC component.
 
     0.410
AHN24891.1
PTS system, glucitol/sorbitol-specific IIA component.
 
     0.403
Your Current Organism:
Gilliamella apicola
NCBI taxonomy Id: 1196095
Other names: ATCC BAA-2448, Candidatus Gilliamella apicola, G. apicola, Gilliamella apicola Kwong and Moran 2013, NCIMB 14804, strain wkB1
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