STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN24888.1Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase; Belongs to the Dps family. (186 aa)    
Predicted Functional Partners:
AHN25613.1
Alkyl hydroperoxide reductase subunit C-like protein.
  
  
 0.733
raiA
Ribosome hibernation protein YfiA.
  
  
 0.649
AHN24887.1
FMN reductase, NADPH-dependent.
       0.567
AHN25428.1
Hypothetical protein.
   
    0.503
nifJ
Pyruvate-flavodoxin oxidoreductase.
    
 
 0.500
AHN24654.1
Manganese superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.495
AHN25915.1
Hypothetical protein.
   
    0.478
AHN25901.1
Hemin receptor, outer membrane protein.
  
   
 0.466
srlA
PTS system, glucitol/sorbitol-specific IIC component.
       0.427
AHN26269.1
Hypothetical protein.
 
     0.424
Your Current Organism:
Gilliamella apicola
NCBI taxonomy Id: 1196095
Other names: ATCC BAA-2448, Candidatus Gilliamella apicola, G. apicola, Gilliamella apicola Kwong and Moran 2013, NCIMB 14804, strain wkB1
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