STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN24905.1Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP. (403 aa)    
Predicted Functional Partners:
AHN24906.1
Putative divergent polysaccharide deacetylase.
   
 0.949
AHN24609.1
Cell division protein FtsX.
 
 
 
 0.942
AHN24913.1
Exported zinc metalloprotease YfgC precursor; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.
 
 
 
 0.760
AHN24946.1
Putative metalloprotease yggG.
 
 
 
 0.706
ftsE
Cell division transporter, ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
   
 0.613
gpmA
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
  
    0.592
AHN26617.1
Tail-specific protease precursor; Belongs to the peptidase S41A family.
  
  
 0.571
AHN24596.1
N-acetylmuramoyl-L-alanine amidase.
 
  
 0.560
AHN27380.1
N-acetylmuramoyl-L-alanine amidase.
 
  
 0.538
mrcA
Multimodular transpeptidase-transglycosylase.
  
     0.510
Your Current Organism:
Gilliamella apicola
NCBI taxonomy Id: 1196095
Other names: ATCC BAA-2448, Candidatus Gilliamella apicola, G. apicola, Gilliamella apicola Kwong and Moran 2013, NCIMB 14804, strain wkB1
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