STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN25136.1Lipopolysaccharide core biosynthesis protein WaaP, heptosyl-I-kinase; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family. (267 aa)    
Predicted Functional Partners:
AHN25137.1
UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG.
  
  0.999
AHN25619.1
Lipopolysaccharide heptosyltransferase I.
 
 
 0.958
AHN25620.1
ADP-heptose--lipooligosaccharide heptosyltransferase II.
 
 
 0.942
AHN25352.1
UDP-glucose:(glucosyl)lipopolysaccharide alpha-1,3-glucosyltransferase WaaO.
  
 
 0.909
AHN27034.1
3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
    
 0.909
AHN27345.1
3-deoxy-D-manno-octulosonic-acid transferase-like.
    
 0.909
AHN25351.1
UDP-glucose:(glucosyl)lipopolysaccharide alpha-1,3-glucosyltransferase WaaO.
  
 
 0.907
AHN25089.1
Lipopolysaccharide core biosynthesis protein RfaY.
   
 
 0.905
AHN25135.1
Putative ATP-dependent endonuclease of the OLD family, YbjD subgroup.
  
    0.790
AHN26307.1
Heptose-I-phosphate ethanolaminephosphotransferase; UPF0141 membrane protein YijP possibly required for phosphoethanolamine modification of lipopolysaccharide.
  
    0.772
Your Current Organism:
Gilliamella apicola
NCBI taxonomy Id: 1196095
Other names: ATCC BAA-2448, Candidatus Gilliamella apicola, G. apicola, Gilliamella apicola Kwong and Moran 2013, NCIMB 14804, strain wkB1
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