STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN25307.1Allophanate hydrolase 2 subunit 1 / Allophanate hydrolase 2 subunit 2. (531 aa)    
Predicted Functional Partners:
AHN25306.1
Lactam utilization protein LamB.
  
 0.999
AHN25308.1
Urea carboxylase without Allophanate hydrolase 2 domains.
  
 0.985
AHN25305.1
Mn2+/Fe2+ transporter, NRAMP family.
  
 0.982
AHN24591.1
Transcriptional regulator KdgR, KDG operon repressor.
  
    0.957
AHN24626.1
Transcriptional regulator, IclR family.
  
    0.957
AHN27054.1
Transcriptional regulator, IclR family.
  
    0.957
AHN26225.1
Transcriptional regulator, IclR family.
  
    0.949
accC
Biotin carboxylase of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
   
  0.943
AHN26259.1
Hypothetical protein YbgI.
 
  
 0.906
mntH
Manganese transport protein MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
  
  
 0.645
Your Current Organism:
Gilliamella apicola
NCBI taxonomy Id: 1196095
Other names: ATCC BAA-2448, Candidatus Gilliamella apicola, G. apicola, Gilliamella apicola Kwong and Moran 2013, NCIMB 14804, strain wkB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.