STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN25342.1dTDP-glucose 4,6-dehydratase. (354 aa)    
Predicted Functional Partners:
AHN25343.1
Glucose-1-phosphate thymidylyltransferase.
 
 0.999
AHN25344.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
 
 0.999
AHN25345.1
dTDP-4-dehydrorhamnose reductase.
 
 0.998
AHN25341.1
Putative glycosyl transferase.
 
  
 0.910
AHN26504.1
Putative oxidoreductase.
  
  
 0.718
AHN26791.1
Galactose-1-phosphate uridylyltransferase.
   
  
 0.665
AHN25874.1
Fe-S protein, lactate dehydrogenase.
   
    0.645
AHN25233.1
UDP-glucose dehydrogenase.
 
  
 0.635
AHN25346.1
Hypothetical protein.
  
    0.606
AHN26259.1
Hypothetical protein YbgI.
  
    0.539
Your Current Organism:
Gilliamella apicola
NCBI taxonomy Id: 1196095
Other names: ATCC BAA-2448, Candidatus Gilliamella apicola, G. apicola, Gilliamella apicola Kwong and Moran 2013, NCIMB 14804, strain wkB1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.