STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN25453.1Transcriptional regulatory protein basR/pmrA. (220 aa)    
Predicted Functional Partners:
pmrB
Sensor protein basS/pmrB.
 0.995
AHN25617.1
Osmosensitive K+ channel histidine kinase KdpD; Member of a two-component regulatory system.
 
 0.897
AHN24822.1
Sensory histidine kinase in two-component regulatory system with RstA.
 
 
 0.886
AHN26103.1
Putative two-component sensor histidine kinase.
 
 0.879
AHN25025.1
Copper sensory histidine kinase CpxA.
 
 0.870
AHN27302.1
Putative two-component system sensor kinase.
 
 0.870
nifJ
Pyruvate-flavodoxin oxidoreductase.
   
 
 0.535
AHN25452.1
Putative permease.
  
  
 0.528
AHN26175.1
Nonribosomal peptide synthetase.
   
  
 0.412
Your Current Organism:
Gilliamella apicola
NCBI taxonomy Id: 1196095
Other names: ATCC BAA-2448, Candidatus Gilliamella apicola, G. apicola, Gilliamella apicola Kwong and Moran 2013, NCIMB 14804, strain wkB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.