STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN25586.1Type IV fimbrial assembly protein PilC. (391 aa)    
Predicted Functional Partners:
AHN25585.1
Type IV fimbrial assembly, ATPase PilB.
 
 0.998
AHN25587.1
Hypothetical protein.
 
  
 0.966
AHN26553.1
Prepilin peptidase dependent protein A precursor.
  
  
 0.940
AHN25279.1
Type IV pilus biogenesis protein PilQ.
 
 
 
 0.926
AHN25513.1
Twitching motility protein PilT.
  
 0.868
AHN25500.1
DNA internalization-related competence protein ComEC/Rec2.
 
  
 0.804
AHN25584.1
Type IV pilin PilA.
 
   
 0.785
AHN26900.1
DNA uptake protein.
  
  
 0.754
AHN25276.1
Hypothetical protein.
   
 
 0.744
dprA
Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake.
 
  
 0.528
Your Current Organism:
Gilliamella apicola
NCBI taxonomy Id: 1196095
Other names: ATCC BAA-2448, Candidatus Gilliamella apicola, G. apicola, Gilliamella apicola Kwong and Moran 2013, NCIMB 14804, strain wkB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.