Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AHN25217.1 | AHN26190.1 | GAPWK_0640 | GAPWK_1617 | Superfamily I DNA and RNA helicase and helicase subunits. | Primosomal replication protein N prime prime. | 0.900 |
AHN26189.1 | AHN26190.1 | GAPWK_1616 | GAPWK_1617 | Hypothetical protein. | Primosomal replication protein N prime prime. | 0.741 |
AHN26189.1 | ackA | GAPWK_1616 | GAPWK_1615 | Hypothetical protein. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.559 |
AHN26190.1 | AHN25217.1 | GAPWK_1617 | GAPWK_0640 | Primosomal replication protein N prime prime. | Superfamily I DNA and RNA helicase and helicase subunits. | 0.900 |
AHN26190.1 | AHN26189.1 | GAPWK_1617 | GAPWK_1616 | Primosomal replication protein N prime prime. | Hypothetical protein. | 0.741 |
AHN26190.1 | ackA | GAPWK_1617 | GAPWK_1615 | Primosomal replication protein N prime prime. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.479 |
ackA | AHN26189.1 | GAPWK_1615 | GAPWK_1616 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Hypothetical protein. | 0.559 |
ackA | AHN26190.1 | GAPWK_1615 | GAPWK_1617 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Primosomal replication protein N prime prime. | 0.479 |