STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN26321.1Putative carboxylase. (318 aa)    
Predicted Functional Partners:
AHN26322.1
Putative cytoplasmic protein.
 
 
 0.972
AHN26323.1
Protein fdrA.
 
 
 0.954
AHN26320.1
DNA-binding transcriptional activator of the allD operon; Belongs to the LysR transcriptional regulatory family.
 
     0.839
AHN26325.1
Putative metabolite transport protein.
 
    0.728
AHN26326.1
Ureidoglycine aminohydrolase.
 
     0.643
AHN26319.1
Serine--pyruvate aminotransferase / L-alanine:glyoxylate aminotransferase.
       0.586
AHN26329.1
Ureidoglycolate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
 
     0.472
AHN27124.1
Anaerobic dimethyl sulfoxide reductase chain C.
  
     0.439
allB
Allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring; Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.
 
     0.412
Your Current Organism:
Gilliamella apicola
NCBI taxonomy Id: 1196095
Other names: ATCC BAA-2448, Candidatus Gilliamella apicola, G. apicola, Gilliamella apicola Kwong and Moran 2013, NCIMB 14804, strain wkB1
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