Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHN25124.1 | AHN26590.1 | GAPWK_0547 | GAPWK_2017 | Uncharacterized protein YrbK; Clustered with lipopolysaccharide transporters. | Sigma factor RpoE negative regulatory protein RseB precursor. | 0.661 |
| AHN25124.1 | AHN26591.1 | GAPWK_0547 | GAPWK_2018 | Uncharacterized protein YrbK; Clustered with lipopolysaccharide transporters. | Sigma factor RpoE negative regulatory protein RseA; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytop [...] | 0.769 |
| AHN25124.1 | AHN27065.1 | GAPWK_0547 | GAPWK_2492 | Uncharacterized protein YrbK; Clustered with lipopolysaccharide transporters. | Syd protein. | 0.773 |
| AHN25124.1 | ftsL | GAPWK_0547 | GAPWK_0489 | Uncharacterized protein YrbK; Clustered with lipopolysaccharide transporters. | Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | 0.774 |
| AHN25124.1 | rraB | GAPWK_0547 | GAPWK_0968 | Uncharacterized protein YrbK; Clustered with lipopolysaccharide transporters. | Ribonuclease E inhibitor RraB; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. | 0.775 |
| AHN25124.1 | slyX | GAPWK_0547 | GAPWK_0167 | Uncharacterized protein YrbK; Clustered with lipopolysaccharide transporters. | SlyX; Belongs to the SlyX family. | 0.750 |
| AHN25319.1 | AHN26590.1 | GAPWK_0742 | GAPWK_2017 | Putative RNA polymerase; Belongs to the sigma-70 factor family. ECF subfamily. | Sigma factor RpoE negative regulatory protein RseB precursor. | 0.425 |
| AHN25319.1 | AHN26591.1 | GAPWK_0742 | GAPWK_2018 | Putative RNA polymerase; Belongs to the sigma-70 factor family. ECF subfamily. | Sigma factor RpoE negative regulatory protein RseA; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytop [...] | 0.872 |
| AHN25319.1 | rpoE | GAPWK_0742 | GAPWK_2019 | Putative RNA polymerase; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.437 |
| AHN26590.1 | AHN25124.1 | GAPWK_2017 | GAPWK_0547 | Sigma factor RpoE negative regulatory protein RseB precursor. | Uncharacterized protein YrbK; Clustered with lipopolysaccharide transporters. | 0.661 |
| AHN26590.1 | AHN25319.1 | GAPWK_2017 | GAPWK_0742 | Sigma factor RpoE negative regulatory protein RseB precursor. | Putative RNA polymerase; Belongs to the sigma-70 factor family. ECF subfamily. | 0.425 |
| AHN26590.1 | AHN26591.1 | GAPWK_2017 | GAPWK_2018 | Sigma factor RpoE negative regulatory protein RseB precursor. | Sigma factor RpoE negative regulatory protein RseA; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytop [...] | 0.998 |
| AHN26590.1 | ftsL | GAPWK_2017 | GAPWK_0489 | Sigma factor RpoE negative regulatory protein RseB precursor. | Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | 0.678 |
| AHN26590.1 | rpoE | GAPWK_2017 | GAPWK_2019 | Sigma factor RpoE negative regulatory protein RseB precursor. | RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.946 |
| AHN26590.1 | rraB | GAPWK_2017 | GAPWK_0968 | Sigma factor RpoE negative regulatory protein RseB precursor. | Ribonuclease E inhibitor RraB; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. | 0.612 |
| AHN26590.1 | slyX | GAPWK_2017 | GAPWK_0167 | Sigma factor RpoE negative regulatory protein RseB precursor. | SlyX; Belongs to the SlyX family. | 0.565 |
| AHN26591.1 | AHN25124.1 | GAPWK_2018 | GAPWK_0547 | Sigma factor RpoE negative regulatory protein RseA; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytop [...] | Uncharacterized protein YrbK; Clustered with lipopolysaccharide transporters. | 0.769 |
| AHN26591.1 | AHN25319.1 | GAPWK_2018 | GAPWK_0742 | Sigma factor RpoE negative regulatory protein RseA; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytop [...] | Putative RNA polymerase; Belongs to the sigma-70 factor family. ECF subfamily. | 0.872 |
| AHN26591.1 | AHN26590.1 | GAPWK_2018 | GAPWK_2017 | Sigma factor RpoE negative regulatory protein RseA; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytop [...] | Sigma factor RpoE negative regulatory protein RseB precursor. | 0.998 |
| AHN26591.1 | AHN26773.1 | GAPWK_2018 | GAPWK_2200 | Sigma factor RpoE negative regulatory protein RseA; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytop [...] | Outer membrane stress sensor protease DegS. | 0.757 |
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