STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN26643.1Major facilitator superfamily MFS_1. (392 aa)    
Predicted Functional Partners:
pheA
Chorismate mutase I / Prephenate dehydratase.
  
  
 0.569
AHN26642.1
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.565
AHN26644.1
2,4-dienoyl-CoA reductase [NADPH].
 
    0.503
AHN26175.1
Nonribosomal peptide synthetase.
 
  
 0.410
AHN25794.1
Major facilitator family transporter.
  
   
 0.402
Your Current Organism:
Gilliamella apicola
NCBI taxonomy Id: 1196095
Other names: ATCC BAA-2448, Candidatus Gilliamella apicola, G. apicola, Gilliamella apicola Kwong and Moran 2013, NCIMB 14804, strain wkB1
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