STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN26826.1Regulator of L-galactonate catabolism YjjM. (305 aa)    
Predicted Functional Partners:
AHN25250.1
HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes; NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family / Ribosylnicotinamide kinase.
   
  
 0.609
AHN25121.1
Transcriptional regulator, GntR family.
  
     0.564
AHN26827.1
Altronate oxidoreductase.
     
 0.536
AHN26825.1
Hexuronate transporter.
  
    0.533
AHN26719.1
Nicotinamide-nucleotide adenylyltransferase.
  
  
 0.525
AHN26828.1
Sorbitol dehydrogenase.
     
 0.504
AHN25591.1
Acetolactate synthase small subunit.
   
    0.491
AHN24961.1
Alcohol dehydrogenase; Acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.456
AHN26142.1
Hypothetical protein.
  
  
 0.443
AHN26144.1
Putative membrane protein.
  
  
 0.424
Your Current Organism:
Gilliamella apicola
NCBI taxonomy Id: 1196095
Other names: ATCC BAA-2448, Candidatus Gilliamella apicola, G. apicola, Gilliamella apicola Kwong and Moran 2013, NCIMB 14804, strain wkB1
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