STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN26887.1Hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family. (310 aa)    
Predicted Functional Partners:
AHN26886.1
Unsaturated fatty acid biosynthesis repressor FabR, TetR family.
   
 
 0.787
AHN25824.1
Transcriptional regulator, LysR family protein; Belongs to the LysR transcriptional regulatory family.
  
     0.744
AHN25890.1
Transcriptional regulator, LysR family.
  
     0.686
AHN26544.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.668
AHN26320.1
DNA-binding transcriptional activator of the allD operon; Belongs to the LysR transcriptional regulatory family.
  
     0.661
AHN26673.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.585
AHN24980.1
Glutamate synthase [NADPH] large chain.
  
  
 0.457
AHN26885.1
Putative lipoprotein signal peptide.
       0.448
Your Current Organism:
Gilliamella apicola
NCBI taxonomy Id: 1196095
Other names: ATCC BAA-2448, Candidatus Gilliamella apicola, G. apicola, Gilliamella apicola Kwong and Moran 2013, NCIMB 14804, strain wkB1
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