STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN26924.1Putative periplasmic protein. (369 aa)    
Predicted Functional Partners:
AHN26926.1
Putative poly(beta-D-mannuronate) O-acetylase; Belongs to the membrane-bound acyltransferase family.
    0.924
AHN26925.1
Putative periplasmic protein.
 
     0.918
pyrF
Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
     
 0.695
AHN26922.1
Translation initiation factor SUI1-related protein.
       0.668
AHN25442.1
Transcriptional regulator, TetR family.
  
   
 0.586
AHN26274.1
Hypothetical protein.
  
     0.485
AHN26272.1
Hypothetical protein.
  
     0.482
AHN26271.1
Hypothetical protein.
  
     0.480
AHN26269.1
Hypothetical protein.
  
     0.479
AHN26270.1
Hypothetical protein.
  
     0.479
Your Current Organism:
Gilliamella apicola
NCBI taxonomy Id: 1196095
Other names: ATCC BAA-2448, Candidatus Gilliamella apicola, G. apicola, Gilliamella apicola Kwong and Moran 2013, NCIMB 14804, strain wkB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.