STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN27184.1Hypothetical protein. (144 aa)    
Predicted Functional Partners:
AHN27183.1
Hypothetical protein.
  
  
 0.980
flgK
Flagellar hook-associated protein FlgK.
  
 
 0.978
AHN27172.1
Flagellar hook-associated protein FlgL.
  
 
 0.922
AHN27182.1
Flagellar basal-body P-ring formation protein FlgA.
  
  
 0.916
AHN27181.1
Flagellar basal-body rod protein FlgB.
  
  
 0.907
fliS
Flagellar biosynthesis protein FliS.
  
  
 0.900
flgC
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
  
  
 0.899
AHN27173.1
Flagellar protein FlgJ [peptidoglycan hydrolase].
  
  
 0.894
AHN27185.1
Flagellar biosynthesis protein FlhB.
  
  
 0.871
AHN27164.1
Flagellar hook-associated protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.870
Your Current Organism:
Gilliamella apicola
NCBI taxonomy Id: 1196095
Other names: ATCC BAA-2448, Candidatus Gilliamella apicola, G. apicola, Gilliamella apicola Kwong and Moran 2013, NCIMB 14804, strain wkB1
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