STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A370_00444Molecular chaperone (small heat shock protein); PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family. (171 aa)    
Predicted Functional Partners:
clpB
ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
  
 
 0.783
A370_04274
ATPase with chaperone activity, ATP-binding subunit; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif; Belongs to the ClpA/ClpB family.
  
 
 0.783
A370_04981
ATP-dependent Clp protease ATP-binding subunit clpA; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; Belongs to the ClpA/ClpB family.
  
 
 0.783
A370_04991
Molecular chaperone of HSP90 family; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein.
  
 
 0.689
A370_00513
Response regulator (CheY-like receiver and HTH DNA-binding domain containing protein); PFAM: Bacterial regulatory proteins, luxR family.
    
 
 0.676
A370_00523
Response regulator (CheY-like receiver and HTH DNA-binding domain containing protein); PFAM: Bacterial regulatory proteins, luxR family.
    
 
 0.676
A370_01538
ATP-dependent transcriptional regulator; PFAM: Bacterial regulatory proteins, luxR family.
    
 
 0.676
A370_02767
ATP-dependent transcriptional regulator; PFAM: Bacterial regulatory proteins, luxR family.
    
 
 0.676
A370_04989
ATP-dependent transcriptional regulator; PFAM: Bacterial regulatory proteins, luxR family.
    
 
 0.676
rplP
Ribosomal protein L16, bacterial/organelle; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.
   
 
 0.618
Your Current Organism:
Clostridium sp. Maddingley
NCBI taxonomy Id: 1196322
Other names: C. sp. Maddingley MBC34-26, Clostridium sp. Maddingley MBC34-26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.