STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A370_05570PFAM: ABC transporter; TIGRFAM: gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. (236 aa)    
Predicted Functional Partners:
A370_05568
TIGRFAM: lantibiotic protection ABC transporter permease subunit, MutG family.
 
 
 0.995
A370_05569
TIGRFAM: lantibiotic protection ABC transporter permease subunit, MutE/EpiE family; lantibiotic protection ABC transporter permease subunit, MutG family.
 
 0.990
A370_00929
Hypothetical protein.
 
 0.959
A370_04809
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
 0.926
A370_03799
Hypothetical protein.
  
 0.890
A370_04851
Hypothetical protein.
  
 0.889
A370_04999
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 
0.824
A370_02607
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
 
 
0.752
atpD
ATP synthase, F1 beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.711
atpA
Proton translocating ATP synthase, F1 alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
 
 0.702
Your Current Organism:
Clostridium sp. Maddingley
NCBI taxonomy Id: 1196322
Other names: C. sp. Maddingley MBC34-26, Clostridium sp. Maddingley MBC34-26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.