STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL93358.1Protein N-acetyltransferase, RimJ/RimL family. (206 aa)    
Predicted Functional Partners:
SDL93386.1
Penicillin amidase.
     0.995
SDM38203.1
Siderophore synthetase component.
 
 0.929
SDM13144.1
Lysine N6-hydroxylase.
 
 
  0.920
SDM38158.1
Lysine N6-hydroxylase.
 
 
  0.920
SDL72868.1
Siderophore synthetase component.
 
 0.889
SDL93414.1
NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains.
 
    0.842
SDM38138.1
L-2,4-diaminobutyrate decarboxylase.
 
 
  0.809
SDM13161.1
L-2,4-diaminobutyrate decarboxylase.
 
 
  0.789
SDN10494.1
L-ornithine N5-oxygenase.
 
 
  0.752
SDL72825.1
Siderophore synthetase component.
 
 
  0.733
Your Current Organism:
Streptomyces wuyuanensis
NCBI taxonomy Id: 1196353
Other names: CGMCC 4.7042, KCTC 29112, S. wuyuanensis, Streptomyces sp. FX61, Streptomyces wuyuanensis Zhang et al. 2013, strain FX61
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