STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM54239.1Anti-anti-sigma factor. (121 aa)    
Predicted Functional Partners:
SDN75868.1
PAS domain S-box-containing protein.
  
 0.990
SDL75664.1
PAS domain S-box-containing protein.
  
 0.946
SDM05271.1
PAS domain S-box-containing protein.
  
 0.946
SDM06081.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
 0.946
SDM06187.1
PAS domain S-box-containing protein.
  
 0.946
SDM50729.1
PAS domain S-box-containing protein.
  
 0.946
SDM92374.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
 0.946
SDN10938.1
PAS domain S-box-containing protein.
  
 0.946
SDN13701.1
PAS domain S-box-containing protein.
  
 0.946
SDN29187.1
PAS domain-containing protein.
  
 0.946
Your Current Organism:
Streptomyces wuyuanensis
NCBI taxonomy Id: 1196353
Other names: CGMCC 4.7042, KCTC 29112, S. wuyuanensis, Streptomyces sp. FX61, Streptomyces wuyuanensis Zhang et al. 2013, strain FX61
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.