STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM70581.1Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (542 aa)    
Predicted Functional Partners:
SDM23941.1
4-aminobutyrate aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.958
SDL96881.1
2-oxoglutarate dehydrogenase E1 component.
  
 0.924
SDL73663.1
Citrate synthase.
   
 0.922
SDM37157.1
Citrate synthase; Belongs to the citrate synthase family.
   
 0.922
SDL73676.1
Citrate synthase; Belongs to the citrate synthase family.
   
  0.921
SDM91878.1
Citrate synthase; Belongs to the citrate synthase family.
   
  0.921
SDN59448.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
   
 0.921
SDL84218.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.917
SDM03602.1
Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase.
  
  
 
0.917
SDN45423.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
  
  
 
0.914
Your Current Organism:
Streptomyces wuyuanensis
NCBI taxonomy Id: 1196353
Other names: CGMCC 4.7042, KCTC 29112, S. wuyuanensis, Streptomyces sp. FX61, Streptomyces wuyuanensis Zhang et al. 2013, strain FX61
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