STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dacADiadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. (284 aa)    
Predicted Functional Partners:
SFC82882.1
YbbR domain-containing protein.
 
  
 0.979
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
   
 
 0.911
SFC41990.1
Phosphomannomutase.
   
 
 0.859
SFC54273.1
Phosphoglucomutase.
   
 
 0.750
SFC82908.1
Hypothetical protein.
       0.679
mutS2
DNA mismatch repair protein MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
 
     0.678
SFC82813.1
Hypothetical protein.
       0.667
argR
Transcriptional regulator of arginine metabolism; Regulates arginine biosynthesis genes.
   
    0.643
SFC88339.1
dsDNA-specific endonuclease/ATPase MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
 
     0.603
SFC82937.1
Phosphate butyryltransferase.
       0.559
Your Current Organism:
Clostridium uliginosum
NCBI taxonomy Id: 119641
Other names: ATCC BAA-53, C. uliginosum, Clostridium uliginosum Matthies et al. 2001, DSM 12992, strain CK55
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