STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WEN_03170COG0143 Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (494 aa)    
Predicted Functional Partners:
leuS
COG0495 Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.997
gltX
glutamyl-tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
  
 0.997
argS
COG0018 Arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.995
WEN_00840
COG0060 Isoleucyl-tRNA synthetase.
  
 0.995
WEN_00055
COG0442 Prolyl-tRNA synthetase.
  
 0.991
asnC
COG0017 Aspartyl/asparaginyl-tRNA synthetases; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
 0.987
lysS
COG1190 Lysyl-tRNA synthetase (class II); Belongs to the class-II aminoacyl-tRNA synthetase family.
  
 0.980
WEN_03175
Signal recognition particle-docking protein FtsY; COG0552 Signal recognition particle GTPase.
  
  
 0.871
recA
COG0468 RecA/RadA recombinase; Belongs to the RecA family.
     
 0.828
WEN_01345
COG0441 Threonyl-tRNA synthetase.
  
 
 0.766
Your Current Organism:
Mycoplasma wenyonii
NCBI taxonomy Id: 1197325
Other names: M. wenyonii str. Massachusetts, Mycoplasma wenyonii str. Massachusetts, Mycoplasma wenyonii strain Massachusetts
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