STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IA57_04615Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)    
Predicted Functional Partners:
IA57_04595
3-oxoacyl-ACP synthase; FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; this condensing enzyme differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.953
IA57_04610
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.953
IA57_04625
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.951
IA57_04605
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.950
IA57_04590
Dialkylrecorsinol condensing enzyme DarA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.947
IA57_04620
Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.944
IA57_04695
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.936
IA57_04660
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.934
IA57_04670
Cell envelope biogenesis protein LolA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.933
IA57_04645
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.925
Your Current Organism:
Mangrovimonas yunxiaonensis
NCBI taxonomy Id: 1197477
Other names: CGMCC 1.12280, LMG 27142, LMG:27142, M. yunxiaonensis, Mangrovimonas yunxiaonensis Li et al. 2013 emend. Hameed et al. 2015, Meridianimaribacter sp. LY, strain LY01, strain LYYY01
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.