STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IA57_05055Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. (410 aa)    
Predicted Functional Partners:
IA57_06825
Cell division protein FtsX; Required for cell division and gliding motility. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.939
IA57_05065
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.859
IA57_05060
Deoxyuridine 5'-triphosphate nucleotidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.844
IA57_00820
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.634
IA57_05070
Nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.585
IA57_03800
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.559
IA57_12230
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.538
IA57_00105
Peptidase M48; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.505
IA57_04520
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.505
IA57_07900
Peptidase M48 Ste24p; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.505
Your Current Organism:
Mangrovimonas yunxiaonensis
NCBI taxonomy Id: 1197477
Other names: CGMCC 1.12280, LMG 27142, LMG:27142, M. yunxiaonensis, Mangrovimonas yunxiaonensis Li et al. 2013 emend. Hameed et al. 2015, Meridianimaribacter sp. LY, strain LY01, strain LYYY01
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