STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IA57_05160Flavodoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)    
Predicted Functional Partners:
IA57_02100
Phenylacetic acid degradation protein PaaN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.978
paaB
phenylacetate-CoA oxygenase; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.970
IA57_02140
phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.968
IA57_02145
Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.966
paaA
ATPase AAA; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.960
IA57_03215
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
  
 0.954
IA57_07510
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.950
IA57_02630
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
   
 0.930
IA57_00180
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.884
IA57_11595
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.877
Your Current Organism:
Mangrovimonas yunxiaonensis
NCBI taxonomy Id: 1197477
Other names: CGMCC 1.12280, LMG 27142, LMG:27142, M. yunxiaonensis, Mangrovimonas yunxiaonensis Li et al. 2013 emend. Hameed et al. 2015, Meridianimaribacter sp. LY, strain LY01, strain LYYY01
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