STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IA57_06415Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)    
Predicted Functional Partners:
sufC
Cysteine desulfurase; Part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.799
IA57_06420
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.794
IA57_09685
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.762
IA57_06425
[Fe-S]-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.
       0.731
IA57_08790
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.702
IA57_07105
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.698
IA57_11150
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.691
IA57_08720
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.631
IA57_00230
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.616
IA57_07100
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.612
Your Current Organism:
Mangrovimonas yunxiaonensis
NCBI taxonomy Id: 1197477
Other names: CGMCC 1.12280, LMG 27142, LMG:27142, M. yunxiaonensis, Mangrovimonas yunxiaonensis Li et al. 2013 emend. Hameed et al. 2015, Meridianimaribacter sp. LY, strain LY01, strain LYYY01
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