STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IA57_09865Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology. (439 aa)    
Predicted Functional Partners:
IA57_09895
Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.886
IA57_09840
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.870
IA57_09870
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.850
IA57_09815
Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.788
IA57_09825
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.763
IA57_09805
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.742
IA57_09845
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.661
IA57_09830
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.653
IA57_09725
Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.583
IA57_09730
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.573
Your Current Organism:
Mangrovimonas yunxiaonensis
NCBI taxonomy Id: 1197477
Other names: CGMCC 1.12280, LMG 27142, LMG:27142, M. yunxiaonensis, Mangrovimonas yunxiaonensis Li et al. 2013 emend. Hameed et al. 2015, Meridianimaribacter sp. LY, strain LY01, strain LYYY01
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.