STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IA57_10085Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)    
Predicted Functional Partners:
IA57_09000
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.815
IA57_03390
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.769
IA57_00045
Ribonuclease Z; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.768
IA57_11395
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.760
IA57_00165
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.754
IA57_01690
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.753
IA57_01485
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.752
IA57_12260
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.752
IA57_01495
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.739
IA57_00975
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.733
Your Current Organism:
Mangrovimonas yunxiaonensis
NCBI taxonomy Id: 1197477
Other names: CGMCC 1.12280, LMG 27142, LMG:27142, M. yunxiaonensis, Mangrovimonas yunxiaonensis Li et al. 2013 emend. Hameed et al. 2015, Meridianimaribacter sp. LY, strain LY01, strain LYYY01
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.