STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANZ44334.1Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (384 aa)    
Predicted Functional Partners:
murF
Hypothetical protein; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
   
 0.939
ddl
Hypothetical protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
 
 0.934
ANZ45735.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 
0.917
ANZ46091.1
Aspartate 4-decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.819
ANZ44159.1
Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.811
ANZ46191.1
Alanine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.811
ANZ44260.1
Nitrilase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.809
ANZ46707.1
Alanine--glyoxylate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.804
ANZ44333.1
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
nadD
Nicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
 
  
 0.683
Your Current Organism:
Cloacibacillus porcorum
NCBI taxonomy Id: 1197717
Other names: C. porcorum, CCUG 62631, Cloacibacillus porcorum Looft et al. 2013, Cloacibacillus sp. CL-84, DSM 25858, strain CL-84
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