STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANZ46667.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RemA family. (84 aa)    
Predicted Functional Partners:
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
 
    0.960
ANZ45494.1
YicC family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.939
ANZ45492.1
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
    0.834
ANZ45491.1
Phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
       0.815
ANZ45490.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.605
cmk
Cytidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.605
hflX
GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
       0.603
ANZ46544.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.474
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate.
       0.463
ANZ45498.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.463
Your Current Organism:
Cloacibacillus porcorum
NCBI taxonomy Id: 1197717
Other names: C. porcorum, CCUG 62631, Cloacibacillus porcorum Looft et al. 2013, Cloacibacillus sp. CL-84, DSM 25858, strain CL-84
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