STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001020565_00551Unannotated protein. (381 aa)    
Predicted Functional Partners:
GCA_001020565_00549
Unannotated protein.
 
 0.998
GCA_001020565_00550
Unannotated protein.
 
 
 0.998
GCA_001020565_00548
Unannotated protein.
       0.705
GCA_001020565_00547
Unannotated protein.
       0.704
GCA_001020565_00546
Unannotated protein.
       0.698
GCA_001020565_02765
Unannotated protein.
   
 
 0.690
GCA_001020565_00409
Unannotated protein.
    
 0.672
GCA_001020565_00963
Unannotated protein.
  
  
  0.654
GCA_001020565_00704
Unannotated protein.
 
  
 0.644
GCA_001020565_01512
Unannotated protein.
  
  
  0.633
Your Current Organism:
Maribacter thermophilus
NCBI taxonomy Id: 1197874
Other names: CGMCC 1.12207, JCM 18466, Maribacter sp. HT7-2, Maribacter thermophilus Hu et al. 2015, strain HT7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.