STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_003078Putative ATP-dependent RNA helicase. (363 aa)    
Predicted Functional Partners:
NEOLI_004402
Superkiller protein 3.
   
 0.972
NEOLI_003608
Exosome complex component RRP42.
   
 0.956
NEOLI_002819
Exosome complex component rrp4.
   
 0.956
NEOLI_002543
Exosome complex component rrp45.
    
 0.955
NEOLI_002445
Exosome complex component rrp40.
   
 0.951
NEOLI_001118
Exosome complex component rrp43.
   
 0.950
NEOLI_004702
Putative ATP-dependent RNA helicase.
 
     0.949
NEOLI_001623
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.934
NEOLI_001235
Exosome complex protein.
   
 0.930
NEOLI_003261
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.925
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.