STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_003620Pre-mRNA-splicing factor CWC22. (255 aa)    
Predicted Functional Partners:
NEOLI_003457
Pre-mRNA-processing factor 17.
   
 0.995
NEOLI_000338
Pre-mRNA-splicing factor cef1.
   
 
 0.990
NEOLI_001171
U5 small nuclear ribonucleoprotein component.
   
 
 0.989
NEOLI_005096
Pre-mRNA-processing factor 19 2.
   
 
 0.987
NEOLI_001179
Peptidyl-prolyl isomerase cwc27.
   
 0.972
NEOLI_002425
Pre-mRNA-splicing factor SLU7.
   
 0.967
NEOLI_003223
Pre-mRNA-splicing factor cwf25.
   
 0.963
NEOLI_003884
Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16.
   
 0.963
NEOLI_000196
ATP-dependent RNA helicase fal1; Belongs to the DEAD box helicase family.
    
 0.962
NEOLI_003778
Pre-mRNA-splicing factor cwf16.
    
 0.962
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.