STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_000760UBX domain-containing protein. (318 aa)    
Predicted Functional Partners:
NEOLI_004010
Cell division control protein 48; Belongs to the AAA ATPase family.
    
 0.964
NEOLI_004973
ATPase family gene 2 protein.
    
 0.949
NEOLI_000030
UBX domain-containing protein 10.
   
 0.931
NEOLI_001199
UBX domain-containing protein 2.
    
 
 0.905
NEOLI_000903
UBX domain-containing protein 1.
   
 0.877
NEOLI_002840
UV excision repair protein rhp23.
   
 0.853
NEOLI_001528
ERAD-associated E3 ubiquitin-protein ligase HRD1.
    
 0.840
NEOLI_000728
26S protease regulatory subunit 4; Belongs to the AAA ATPase family.
   
 
  0.828
NEOLI_002131
Protein MSP1.
   
 0.795
NEOLI_000307
Putative AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.795
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.