STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_000237Nucleoporin nup146. (1459 aa)    
Predicted Functional Partners:
NEOLI_003250
Nucleoporin nup189.
   
 0.994
NEOLI_000199
Exportin-1.
    
 0.992
NEOLI_003387
Nucleoporin NSP1.
   
 0.992
NEOLI_004518
Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.
    
 0.989
NEOLI_002909
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.989
NEOLI_001620
Nuclear pore protein.
    
 0.989
NEOLI_000565
Nucleoporin nup186.
   
 0.987
NEOLI_002138
Putative nucleoporin.
    
 0.985
NEOLI_000771
Carboxypeptidase; Belongs to the peptidase S10 family.
    
 0.982
NEOLI_001355
Nucleoporin nup124.
    
 0.982
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.